Installation

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Deprecated

This product is deprecated and not maintained anymore.

Package content

Content

Content details:

File name Description
discngine.connector.knime.sbdf.update-X.Y.Z.zip The KNIME update site to be deployed on KNIME server and KNIME desktop where X.Y.Z is the version of the Connector
discngine.connector.knime.sbdf-X.Y.Z.jar The jar file containing the nodes. You can use as a drop-in extension for KNIME Desktop
Discngine.DataFunction.Knime.Analyst.spk The Discngine KNIME Data Functions for Spotfire add-in spk for Spotfire Analyst
Discngine.DataFunction.Knime.WebPlayer.spk The Discngine KNIME Data Functions for Spotfire add-in spk for Spotfire Web Player
Discngine.Knime.Connector.sdn The KNIME Connector Spotfire distribution that contains both SPK for usage in Analyst and Web Player

Prerequisites

Spotfire 10.3+ (including 11+)

User must be able to save items in Spotfire library:

  • Needs Browse + Access + Modify rights in the related library folders:

Spotfire Library Folder Right example

  • Needs following Spotfire licenses:

Spotfire licenses need

KNIME version 4.4+.

Mandatory KNIME plugins:

  • KNIME Base Chemistry Types & Nodes

Recommended KNIME plugins:

  • Vernalis KNIME Nodes
  • RDKit Nodes

Installation on KNIME client and server

1 - Install the Discngine KNIME Custom Nodes on your KNIME Server

Upload the zip file to your KNIME Server and execute the following command:


sudo -u <your knime username> <full path to knime executable>/knime -application org.eclipse.equinox.p2.director -nosplash -consolelog -r 'jar:file:<full path to the uploaded update site file>/discngine.connector.knime.sbdf.update-<X.Y.Z>.zip!' -i discngine.connector.knime.sbdf

Here is the result of the installation:

Log installation of updatesite

2 - Install the KNIME Custom Nodes on your KNIME Desktop client

Click on Help > Install New Software:

Install_01

In the next window, follow instruction in the screen capture below:

Install_02

Select the Knime SBDF I/O feature to be installed and click on "Next":

Install_03

In the next screen, you will see a summary of the collections which will be installed. Check that you have Knime SBDF I/O will be installed and click on "Next":

Install_04

In the next screen, accept the license agreements.

You may encoutered a security warning when installing the Knime SBDF I/O feature on your desktop as the current plugin is not currently signed. You can proceed and click on "Install Anyway".

Note

This signing issues will be solved in a future release.

Restart KNIME Desktop.

Install_05

You will now have new available Nodes to use for Discngine KNIME Data Functions.

Install_06

Installation on Spotfire

1 - Deploy the .sdn file to your area using the Spotfire administration tool

At the end you must have these extensions activated:

Area after Deployment Core sdn

Note: Do not forget to update the corresponding Web Player to be able to use the KNIME Data Functions from the Web Player interface.

2 - Set Discngine KNIME Data Functions preferences

Launch Spotfire analyst with an administration authorized account and go to Tools > Administration Manager:

Spotfire_Preferences_01

Go to Preferences tab and select the group that you want to authorized for KNIME Data Functions.

Spotfire_Preferences_02

In the DiscngineKnimeDataFunction > General preferences node:

  • Fill the DefaultLibraryPath to the root Spotfire library path where the registered data functions will be stored by default
  • Fill the LicenseKey with the license provided by Discngine
  • You may fill the warning period expiration (in days) if you want to be warn that the current license will expire in X days before expiration

Spotfire_Preferences_03

In the DiscngineKnimeDataFunction > Configuration preferences node:

  • Fill the knime server url (ending with /knime):

Spotfire_Preferences_04

You can now use the Discngine KNIME Data Functions Spotfire addin. See the user guide for more more details.