Installation

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Package content

Content

Content details:

File name Description
discngine.connector.knime.sbdf.update-X.Y.Z.zip The KNIME update site to be deployed on KNIME server and KNIME desktop where X.Y.Z is the version of the Connector
discngine.connector.knime.sbdf-X.Y.Z.jar The jar file containing the nodes. You can use as a dropins extension for KNIME Desktop
Discngine.DataFunction.Knime.Analyst.spk The Discngine KNIME Data Functions for Spotfire addin spk for Spotfire Analyst
Discngine.DataFunction.Knime.WebPlayer.spk The Discngine KNIME Data Functions for Spotfire addin spk for Spotfire Web Player
Discngine.Knime.Connector.sdn The KNIME Connector Spotfire distribution that contains both SPK for usage in Analyst and Web Player

Prerequisite

Spotfire 10.3+ (including 11+)

User must be able to save items in Spotfire library:

  • Needs Browse + Access + Modify rights in the related library folders:

Spotfire Library Folder Right example

  • Needs following Spotfire licenses:

Spotfire licenses need

KNIME version 4.4+.

Mandatory KNIME plugins:

  • KNIME Base Chemistry Types & Nodes

Recommended KNIME plugins:

  • Vernalis KNIME Nodes
  • RDKit Nodes

Installation on KNIME client and server

1 - Install the Discngine KNIME Custom Nodes on your KNIME Server

Upload the zip file to your KNIME Server and execute the following command:


sudo -u <your knime username> <full path to knime executable>/knime -application org.eclipse.equinox.p2.director -nosplash -consolelog -r 'jar:file:<full path to the uploaded update site file>/discngine.connector.knime.sbdf.update-<X.Y.Z>.zip!' -i discngine.connector.knime.sbdf

Here is the result of the installation:

Log installation of updatesite

2 - Install the KNIME Custom Nodes on your KNIME Desktop client

Click on Help > Install New Software:

Install_01

In the next window, follow instruction in the screen capture below:

Install_02

Select the Knime SBDF I/O feature to be installed and click on "Next":

Install_03

In the next screen, you will see a summary of the collections which will be installed. Check that you have Knime SBDF I/O will be installed and click on "Next":

Install_04

In the next screen, accept the license agreements.

You may encoutered a security warning when installing the Knime SBDF I/O feature on your desktop as the current plugin is not currently signed. You can proceed and click on "Install Anyway".

Note

This signing issues will be solved in a future release.

Restart KNIME Desktop.

Install_05

You will now have new available Nodes to use for Discngine KNIME Data Functions.

Install_06

Installation on Spotfire

1 - Deploy the .sdn file to your area using the Spotfire administration tool

At the end you must have these extensions activated:

Area after Deployment Core sdn

Note: Do not forget to update the corresponding Web Player to be able to use the KNIME Data Functions from the Web Player interface.

2 - Set Discngine KNIME Data Functions preferences

Launch Spotfire analyst with an administration authorized account and go to Tools > Administration Manager:

Spotfire_Preferences_01

Go to Preferences tab and select the group that you want to authorized for KNIME Data Functions.

Spotfire_Preferences_02

In the DiscngineKnimeDataFunction > General preferences node:

  • Fill the DefaultLibraryPath to the root Spotfire library path where the registered data functions will be stored by default
  • Fill the LicenseKey with the license provided by Discngine
  • You may fill the warning period expiration (in days) if you want to be warn that the current license will expire in X days before expiration

Spotfire_Preferences_03

In the DiscngineKnimeDataFunction > Configuration preferences node:

  • Fill the knime server url (ending with /knime):

Spotfire_Preferences_04

You can now use the Discngine KNIME Data Functions Spotfire addin. See the user guide for more more details.